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Comparison of GENCODE and RefSeq gene annotation and the impact of reference geneset on variant effect prediction
The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression
GENCODE: the reference human genome annotation for The ENCODE Project
GENCODE pseudogenes
GENCODE: producing a reference annotation for ENCODE
Multiple evidence strands suggest that there may be as few as 19,000 human protein-coding genes
The GENCODE pseudogene resource
Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci
Improving GENCODE reference gene annotation using a high-stringency proteogenomics workflow
Comprehensive comparative homeobox gene annotation in human and mouse